BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H11SP1|AL428988
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig266 1762 0.0
>3x_Contig266
Length = 1662
Score = 1762 bits (888), Expect = 0.0
Identities = 892/894 (99%)
Strand = Plus / Plus
Query: 1 gatcttaagawatgatcagtgacgtgtcaagccccattagtgaagtgcctttcgttgaga 60
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gatcttaagaaatgagcagtgacgtgtcaagccccattagtgaagtgcctttcgttgaga 473
Query: 61 aatttctcggtgaagtagaatgcgaggaatatttacccacatttgagaaattccgtttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aatttctcggtgaagtagaatgcgaggaatatttacccacatttgagaaattccgtttat 533
Query: 121 ttgatgaggataggctatattacttggatcgtgagattctagaagaacttggagtgaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttgatgaggataggctatattacttggatcgtgagattctagaagaacttggagtgaaga 593
Query: 181 agattggtgataagatcaagattttgaaacaatctcgtcagcttagaagagacgcttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 agattggtgataagatcaagattttgaaacaatctcgtcagcttagaagagacgcttctg 653
Query: 241 ggttcaaccccaagaaagaactcgtcgagatcaccgccaaaatcaatgctttgaattcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggttcaaccccaagaaagaactcgtcgagatcaccgccaaaatcaatgctttgaattcaa 713
Query: 301 atccactgtcgattaatgaggagttggttactgataaacactcggtgattttcattttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 atccactgtcgattaatgaggagttggttactgataaacactcggtgattttcattttga 773
Query: 361 acgatgggtctgcaaagaaagttaacgttaacgggtgtttcaatgcccattcgatcaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 acgatgggtctgcaaagaaagttaacgttaacgggtgtttcaatgcccattcgatcaaga 833
Query: 421 agaaactaatcaaacgtttaccatcggaattcatctctattgatcctgttacaaaggaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 agaaactaatcaaacgtttaccatcggaattcatctctattgatcctgttacaaaggaag 893
Query: 481 ccactcattcgtcccaagattacgacgtgtttgtggtggattatgtgaagaacgtgttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ccactcattcgtcccaagattacgacgtgtttgtggtggattatgtgaagaacgtgttac 953
Query: 541 atttgctatacgatgtggaactagtcacaatttgtcactcaagcgaccgcttggagaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 atttgctatacgatgtggaactagtcacaatttgtcactcaagcgaccgcttggagaaga 1013
Query: 601 acaggttgatatttgtatctaaggatcagactccaagcgagaaagctatcttcacctcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 acaggttgatatttgtatctaaggatcagactccaagcgagaaagctatcttcacctcga 1073
Query: 661 aaaaagtttatttgaagacattgagtgtcatgcaacagatggggtctcaaccaggagctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 aaaaagtttatttgaagacattgagtgtcatgcaacagatggggtctcaaccaggagctg 1133
Query: 721 gaagaccactgttatcaggacctggaaccaatgccttgaggattgagaatagaagcgata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 gaagaccactgttatcaggacctggaaccaatgccttgaggattgagaatagaagcgata 1193
Query: 781 atatccgagaaatcttcacacaaagacctcctactgagttgatttctaccaatttacctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 atatccgagaaatcttcacacaaagacctcctactgagttgatttctaccaatttacctg 1253
Query: 841 aatacttcccacatacagacattaacaggttgaagaagactttaagaaattcta 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 aatacttcccacatacagacattaacaggttgaagaagactttaagaaattcta 1307
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6504
Number of Sequences: 1807
Number of extensions: 6504
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)